Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGGAAGAGAGAGCACCGCCACTTTACTGGGATGCAAT
(((((.(((((((((((((((&))))))))............)))))..........)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367614
GeneSymbolDZANK1
Binding site2185,2229
Score0.846
Seed0
Au0.485
Energy-19.1
Binding len44
Me-5.839
Phylopstem2.1802676540540538
Phylopflank2.2895070175
Longest consecutive pairings8
Position of longest consecutive pairings36
Pairings in 3prime end8
PositionCDS
2D Structure