Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATGTATAAACATTTGTGTGCCAA
...(((((((((((((......&.))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001160148
GeneSymbolDDHD1
Binding site3838,3863
Score0.923
Seed0
Au0.662
Energy-17.0
Binding len16
Me-6.515
Phylopstem0.30388714285714286
Phylopflank-0.06757039000000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure