Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATAGTGTTTGCCAGGA
.(((((((.(((.(((......&))).))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001160234
GeneSymbolATP1A1
Binding site2233,2249
Score0.846
Seed1
Au0.529
Energy-16.8
Binding len16
Me-6.139
Phylopstem5.346162542857144
Phylopflank4.9088780475
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure