Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGACGCAGGTTGAAGGGG
...((((.((((((...(((.&)))....)))))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001160246
GeneSymbolRPAIN
Binding site533,552
Score0.923
Seed0
Au0.544
Energy-17.3
Binding len19
Me-9.797
Phylopstem-0.04517391666666667
Phylopflank0.15991702875000008
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure