Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTGCCCTTACAGCCCTAAGTGGCTGCC
..((((((((((((((((((.&.))))))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331
GeneSymbolCTNND1
Binding site3468,3500
Score0.923
Seed1
Au0.441
Energy-27.7
Binding len24
Me-4.957
Phylopstem1.4723393909090914
Phylopflank1.6388582274999997
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure