Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGCGTGTCTGCAGCTGCGT
.(((((((((((.(((.(((.&)))..)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367711
GeneSymbolHRH2
Binding site3398,3421
Score1.0
Seed1
Au0.353
Energy-22.7
Binding len23
Me-5.082
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure