Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGAACATGGGCAAGGCTGTAGCAATGGACCACTTTTACGGCTCTAGGGTTC
.((((((((((((((((((..&.)))).)))))))).........................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001161630
GeneSymbolKDM4E
Binding site2073,2126
Score1.0
Seed1
Au0.529
Energy-25.2
Binding len46
Me-3.793
Phylopstem0.12104054795454545
Phylopflank-0.34732092499999984
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end6
Position3UTR
2D Structure