Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTAGTTACGGTGTTTGCTAGGC
.(((((((.(((.(((((....&.))))).))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001162407
GeneSymbolCLK1
Binding site205,229
Score0.846
Seed1
Au0.324
Energy-17.7
Binding len19
Me-6.139
Phylopstem0.7246205714285715
Phylopflank0.82049028
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure