Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGCTAGA
..((((((((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001162429
GeneSymbolPDCD6IP
Binding site5866,5877
Score0.923
Seed1
Au0.721
Energy-15.1
Binding len11
Me-8.071
Phylopstem2.896852
Phylopflank2.506155875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure