Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCAGCAAATATTCACTGGCACCTGGTGTGTGCCAGGC
.(((((((((((...(((....&.))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001162505
GeneSymbolPEDS1
Binding site2035,2072
Score0.923
Seed1
Au0.471
Energy-20.9
Binding len17
Me-6.675
Phylopstem-0.1968789090909091
Phylopflank0.0785324085
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure