Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTCAAAGCAGTCCACAAACAAATTCTTCCTTATGTTGTCTGTGTCAGGG
.(((((((((((((((((....&.)))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001162529
GeneSymbolFAM135A
Binding site230,283
Score1.0
Seed1
Au0.588
Energy-18.8
Binding len21
Me-3.793
Phylopstem0.8857378631578947
Phylopflank0.9117939399999999
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end4
Position5UTR
2D Structure