Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGATGCAGAGGTA
..((((((((....(((((((&)))))))))))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001162894
GeneSymbolKIAA0040
Binding site1941,1958
Score0.923
Seed1
Au0.529
Energy-23.2
Binding len17
Me-13.275
Phylopstem-0.1333729788888889
Phylopflank-0.143620386
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure