Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGTGAGTATCAGTT
.((((((((.(((((((((...&))))))))).))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001367721
GeneSymbolCASK
Binding site4663,4684
Score1.0
Seed1
Au0.471
Energy-21.8
Binding len21
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure