Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGGGGTGCCGGGTC
(((((((((.(..(((......&)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001163
GeneSymbolAPBA1
Binding site5804,5820
Score1.0
Seed1
Au0.397
Energy-17.4
Binding len16
Me-9.816
Phylopstem4.423714444444445
Phylopflank3.064699385
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure