Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTTTGCATTGTCTGCA
.....(((.((((((((((((.&)))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001163435
GeneSymbolTBCK
Binding site7880,7897
Score0.846
Seed0
Au0.676
Energy-16.3
Binding len17
Me-14.722
Phylopstem-0.80484323
Phylopflank-0.32624442675000004
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure