Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGCCCAGGAAGGCTGGGTGAAGTGACCATCTAAATTGCAGGA
....((((((((((((((((.&)))....))))))))......................))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001163446
GeneSymbolCPA4
Binding site2184,2227
Score0.846
Seed0
Au0.529
Energy-21.0
Binding len43
Me-9.547
Phylopstem-0.018941742857142837
Phylopflank0.03669481375000004
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure