Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCAGCAGCTGCAGG
((((((((((.(((((.....&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367764
GeneSymbolCCDC136
Binding site1531,1548
Score0.923
Seed1
Au0.397
Energy-24.9
Binding len17
Me-6.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure