Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTCCTTCTACAGGTGTGTATGCTAATGGG
.(((((((((((.((((((...&.))))))....)))))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001163790
GeneSymbolPTBP3
Binding site289,322
Score0.846
Seed1
Au0.632
Energy-18.0
Binding len25
Me-5.082
Phylopstem0.06398486153846156
Phylopflank0.20517363500000002
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure