Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTGCATTCAGGCAGCTGCAAC
((((((((((((.((((.(((&))).)))).))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331007
GeneSymbolSMG7
Binding site5575,5599
Score0.923
Seed1
Au0.559
Energy-22.8
Binding len24
Me-5.227
Phylopstem2.6885235
Phylopflank1.2088335125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure