Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCATTGCAACCTCCTGTAATGCAGCAGCAGC
((((.((((((((((((((((&)))....)))))))).........))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331007
GeneSymbolSMG7
Binding site2618,2653
Score0.827
Seed0
Au0.544
Energy-21.4
Binding len35
Me-8.057
Phylopstem2.7984656551724134
Phylopflank4.188820235
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure