Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACACAGTATAGCAGGTGCCAGGA
.((((((((....((((.....&.))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164116
GeneSymbolCASS4
Binding site3843,3867
Score1.0
Seed1
Au0.559
Energy-16.8
Binding len18
Me-12.497
Phylopstem-0.226500225
Phylopflank-0.20307441999999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure