Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCAAGATGCATTGATGCCAA
...((((((.((((((((((((&)))))....))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164344
GeneSymbolZBTB20
Binding site4400,4423
Score0.846
Seed0
Au0.662
Energy-17.5
Binding len23
Me-7.757
Phylopstem4.646305625
Phylopflank4.058483262499999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure