Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGAGTAAGCCAGGTG
(((((((.(((..(((......&)))..))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164386
GeneSymbolRAPGEF6
Binding site3749,3766
Score0.846
Seed1
Au0.471
Energy-18.6
Binding len17
Me-10.887
Phylopstem1.3143193285714285
Phylopflank2.8992894599999994
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure