Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCGCCATTCTATCCAGCATGTGCCAGGA
.(((((((((...((((((...&.))))..))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164386
GeneSymbolRAPGEF6
Binding site2119,2149
Score0.846
Seed1
Au0.588
Energy-18.2
Binding len22
Me-11.254
Phylopstem0.6165904444444444
Phylopflank0.6278014726875001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure