Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTGCATCTACGGTGTGGCAGGG
.((((.(((((.((((((((((&)))))))))).....))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164415
GeneSymbolHSFX2
Binding site355,381
Score0.846
Seed0
Au0.368
Energy-22.1
Binding len26
Me-9.041
Phylopstem-0.37979070000000004
Phylopflank-0.5270348825000001
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end8
Position5UTR
2D Structure