Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTATATTGTTTGATCAGGG
.(((((((.((((((((.((..&)).)))))))).)).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164530
GeneSymbolZNF135
Binding site1780,1801
Score0.846
Seed1
Au0.574
Energy-17.5
Binding len21
Me-4.85
Phylopstem-0.438602025
Phylopflank-0.2565191875
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure