Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATAGATGTGTGATGCCAGGA
.(((((((((((((((......&)))).....)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164629
GeneSymbolGTDC1
Binding site9222,9244
Score0.923
Seed1
Au0.603
Energy-16.8
Binding len22
Me-3.793
Phylopstem5.571425714285714
Phylopflank5.05784082375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure