Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTGTTTCTGTAGG
((((((..(((((((((((((&)))))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367823
GeneSymbolARHGEF18
Binding site4662,4684
Score1.0
Seed0
Au0.382
Energy-25.6
Binding len22
Me-7.795
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure