Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCAACAGCATTAGCGGCAGTGTGCCAGGTG
(((((((((((..(((.(((..&.))).)))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001331009
GeneSymbolITSN1
Binding site3677,3710
Score0.808
Seed1
Au0.456
Energy-21.5
Binding len23
Me-8.574
Phylopstem1.3401032727272726
Phylopflank4.712236242000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure