Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCATTTTAACAAGATGCCCAGGTG
(((((((((..(((((((((((&)))))))))))........))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164695
GeneSymbolIYD
Binding site3476,3506
Score0.923
Seed1
Au0.574
Energy-20.3
Binding len30
Me-8.005
Phylopstem0.08616515454545451
Phylopflank-0.03905542624999999
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end8
Position3UTR
2D Structure