Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCACAGTTGCCAGGTT
((((((((.....(((.(((((&))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164695
GeneSymbolIYD
Binding site2139,2158
Score0.846
Seed1
Au0.5
Energy-17.2
Binding len19
Me-13.697
Phylopstem-0.22320517499999998
Phylopflank-0.17423664750000004
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure