Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACCAAGAATGCCAGGA
.((((((((.(...((((....&))))...).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164750
GeneSymbolASPH
Binding site3361,3379
Score0.846
Seed1
Au0.544
Energy-15.6
Binding len18
Me-10.529
Phylopstem3.531834375
Phylopflank4.7126082587500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure