Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGCTACATTGCCAGGA
.(((((((....((((((..(.&)..))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164751
GeneSymbolASPH
Binding site2938,2955
Score0.923
Seed1
Au0.647
Energy-17.4
Binding len17
Me-12.264
Phylopstem0.010657085714285685
Phylopflank0.272343485
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure