Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCATTTACTATCATGCTACATTGCCAGGA
.(((((((....((((((..(.&.)..))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164753
GeneSymbolASPH
Binding site2797,2829
Score1.0
Seed1
Au0.647
Energy-17.9
Binding len18
Me-12.264
Phylopstem0.36664657142857143
Phylopflank0.74950579125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure