Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGGGTTGGGAGCCAGGC
.((((((...((((.(((((((&))))))).))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001164824
GeneSymbolSMIM12
Binding site4840,4862
Score0.846
Seed1
Au0.471
Energy-23.6
Binding len22
Me-9.141
Phylopstem0.16578754285714284
Phylopflank0.45570240375000015
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure