Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTAGTACGGCGGCTCGCGAG
((((((((((.((..((.((.&)).))..)).)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331009
GeneSymbolITSN1
Binding site47,69
Score0.846
Seed1
Au0.338
Energy-19.1
Binding len22
Me-8.355
Phylopstem2.0819257818181818
Phylopflank1.1894882825000002
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure