Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCGTTTTGTCTTCTTCTAAGGTGTGTGTTGGGTT
((((((((((((...((((...&.))))...)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001165893
GeneSymbolNPAS3
Binding site3368,3405
Score1.0
Seed1
Au0.588
Energy-18.9
Binding len21
Me-6.819
Phylopstem2.652414083333333
Phylopflank3.1807087412499992
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure