Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGGTAGTATGCCAGGA
.((((((((((....(((((..&)))))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166
GeneSymbolBIRC2
Binding site3182,3201
Score0.923
Seed1
Au0.574
Energy-21.7
Binding len19
Me-10.022
Phylopstem4.7561087
Phylopflank5.159172075
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure