Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGCTGTGCCAGT
..((((((((...(((((....&)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166019
GeneSymbolAP1B1
Binding site3514,3530
Score0.923
Seed1
Au0.338
Energy-18.2
Binding len16
Me-12.418
Phylopstem4.735937375000001
Phylopflank5.849629625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure