Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGCTACTGCAGTGGAAA
((.((.(((((((.(((((((&)))))).).))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001367860
GeneSymbolNEU3
Binding site1661,1683
Score0.846
Seed0
Au0.588
Energy-19.1
Binding len22
Me-8.253
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure