Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCAGAATTGTCATCATGAGGCCCTGGTTGTGTGCTGGGC
.(((((((((((((........&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166135
GeneSymbolRBM28
Binding site9227,9269
Score0.923
Seed1
Au0.397
Energy-19.0
Binding len15
Me-4.762
Phylopstem0.18856643076923077
Phylopflank-0.15436844750000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure