Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGATTGTATGAATTTTAATTGTTCAGTTAACGTGTTTCTAGGTT
((((((((((((((.(((((((&)))))))))))))))...........................)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166139
GeneSymbolLCORL
Binding site4894,4943
Score0.923
Seed1
Au0.706
Energy-16.4
Binding len49
Me-4.673
Phylopstem3.2300398536585373
Phylopflank2.5736409375000004
Longest consecutive pairings15
Position of longest consecutive pairings34
Pairings in 3prime end7
Position3UTR
2D Structure