Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCACTGGTACAGACGTGTGCTGGGTT
(((((((((((..((((.....&.))))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166208
GeneSymbolSYNPO
Binding site5329,5358
Score0.846
Seed1
Au0.471
Energy-18.7
Binding len20
Me-8.574
Phylopstem-0.3568760909090909
Phylopflank-0.04336230000000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure