Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTGTGTCTGTAGGTC
(((((((((((.((((((....&)))))))))))))...)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166209
GeneSymbolSYNPO
Binding site4516,4537
Score0.923
Seed1
Au0.544
Energy-18.3
Binding len21
Me-7.284
Phylopstem0.016285757142857134
Phylopflank0.13914098125000005
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure