Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTACAGTAGATGCAGTTACCTGGCAACATTGCTACATTGATGGCCGGGTG
(((((((...((((((((....&.))))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166245
GeneSymbolHPSE2
Binding site711,763
Score0.808
Seed1
Au0.485
Energy-23.7
Binding len20
Me-8.55
Phylopstem-0.17035827662500003
Phylopflank-0.2808964231500001
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure