Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGCAGAGGGGCCCCCAGAACTTTGTGTGTGTGTGTGCACGCGCGCGCGTGTGTGCCCAGGTG
(((((((((((.((((......&.))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166254
GeneSymbolTBXAS1
Binding site61,127
Score0.923
Seed1
Au0.279
Energy-19.3
Binding len18
Me-7.284
Phylopstem-0.10435394999999999
Phylopflank-0.47439042875
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end2
Position5UTR
2D Structure