Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACCGCAGCTGCT
..(((((((((((....((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331010
GeneSymbolITSN1
Binding site12043,12059
Score0.923
Seed1
Au0.441
Energy-26.1
Binding len16
Me-6.782
Phylopstem-0.6365035181818182
Phylopflank-0.4230603262499999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure