Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTACATCCGCTTCTGCAGC
((((((..((((.((((.(((&))).)))).))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331010
GeneSymbolITSN1
Binding site4210,4232
Score0.846
Seed0
Au0.338
Energy-23.9
Binding len22
Me-9.084
Phylopstem3.9589348333333327
Phylopflank4.737827385000001
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure