Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTACCTGCTGTATGTCAAGGC
.(((((((((((..((((....&.))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166293
GeneSymbolSSX2IP
Binding site5018,5041
Score0.923
Seed1
Au0.618
Energy-17.3
Binding len18
Me-5.939
Phylopstem5.105271000000001
Phylopflank4.1479459125
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure