Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTACGCAAGAATTGTATGCCCAATCCGTTATGAATGGGTA
((((((((((((((((((((((&))))))))......))))))))))...............)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001166301
GeneSymbolDHX40
Binding site1863,1907
Score0.923
Seed1
Au0.603
Energy-20.8
Binding len44
Me-3.938
Phylopstem4.885033641860465
Phylopflank4.732896683750001
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure